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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 7034 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
JQ798324.1 nt Meconopsis integrifolia isolate H1 ... 825 bp Meconopsis integrifolia QL-PLN-00-007 600 bp View
JQ798325.1 nt Meconopsis integrifolia isolate H2 ... 824 bp Meconopsis integrifolia QL-PLN-00-007 599 bp View
JQ798327.1 nt Meconopsis integrifolia isolate H4 ... 824 bp Meconopsis integrifolia QL-PLN-00-007 599 bp View
JQ798328.1 nt Meconopsis integrifolia isolate H5 ... 823 bp Meconopsis integrifolia QL-PLN-00-007 599 bp View
JQ798329.1 nt Meconopsis integrifolia isolate H6 ... 824 bp Meconopsis integrifolia QL-PLN-00-007 600 bp View
JQ798330.1 nt Meconopsis integrifolia isolate H7 ... 824 bp Meconopsis integrifolia QL-PLN-00-007 600 bp View
JQ798331.1 nt Meconopsis integrifolia isolate H8 ... 718 bp Meconopsis integrifolia QL-PLN-00-007 599 bp View
JQ798332.1 nt Meconopsis integrifolia isolate H9 ... 718 bp Meconopsis integrifolia QL-PLN-00-007 599 bp View
JQ798333.1 nt Meconopsis integrifolia isolate H12... 825 bp Meconopsis integrifolia QL-PLN-00-007 601 bp View
JQ798334.1 nt Meconopsis integrifolia isolate H15... 823 bp Meconopsis integrifolia QL-PLN-00-007 599 bp View
JQ798335.1 nt Meconopsis integrifolia isolate H16... 822 bp Meconopsis integrifolia QL-PLN-00-007 598 bp View
JQ798336.1 nt Meconopsis integrifolia isolate H17... 713 bp Meconopsis integrifolia QL-PLN-00-007 599 bp View
JQ798337.1 nt Meconopsis integrifolia isolate H18... 713 bp Meconopsis integrifolia QL-PLN-00-007 599 bp View
JQ798338.1 nt Meconopsis integrifolia isolate H19... 713 bp Meconopsis integrifolia QL-PLN-00-007 599 bp View
JQ798339.1 nt Meconopsis integrifolia isolate H20... 713 bp Meconopsis integrifolia QL-PLN-00-007 599 bp View
JQ798374.1 nt Meconopsis simplicifolia voucher Cu... 824 bp Meconopsis simplicifolia QL-PLN-00-007 599 bp View
JQ798375.1 nt Meconopsis simplicifolia voucher Se... 825 bp Meconopsis simplicifolia QL-PLN-00-007 600 bp View
JQ798376.1 nt Meconopsis simplicifolia voucher Se... 824 bp Meconopsis simplicifolia QL-PLN-00-007 599 bp View
JQ798377.1 nt Meconopsis betonicifolia voucher Cu... 825 bp Meconopsis betonicifolia QL-PLN-00-007 600 bp View
JQ798378.1 nt Meconopsis betonicifolia voucher La... 825 bp Meconopsis betonicifolia QL-PLN-00-007 600 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.