Match details
Record ID: |
JQ798329.1 |
Database: |
nt |
Go to original record |
Description: |
Meconopsis integrifolia isolate H6 tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence; chloroplast. |
Taxon: |
Meconopsis integrifolia |
Original size: |
824 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
12 |
611 |
+ |
600 bp |
|
1 cgaaatcggt agacgctacg gacttgattg gattgagcct tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccctgg aattaaaaat
101 gggcaatcct gagccaaatc ctgttttcag aaaacaaatt aagggatttc
151 tgaaagcgag aataaaaaaa ggataggtgc agagactcaa tggaagctgt
201 tctaatgaat ggagttgact gcgttggtag aggaatcctt ctattaaatt
251 ttaatttcaa tcccataaag aatgagggat gaacctatat acgatacgta
301 cgtatacgta ctgaaatatc aaagattcta ttaatgccgc cctaaatata
351 tattttttta cataaaaaaa ggaataattt ttgtgaatct attccaagtt
401 gaaggaagaa tataaaattc agtgatcaaa ccattcactc catagtctga
451 tagatctttt gacgaactga ttaatcggac gagaataaag atagagtccc
501 gttctacatg tcaatatcaa taccgacaac aatgaaattt atagtaagag
551 gaaaatccgt cgactttata aatcgtgagg gttcaagtcc ctctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.70e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
600 |
581 |
2.70e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.