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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown


2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed


3) Select database(s) *
GenBank nt section (NCBI)
ENA transgenic data class division (EMBL-EBI)
ENA patent data class division (EMBL-EBI)
Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches

* required field


Results : 266 amplicons



Amplicons found in the selected databases
Record ID Database Record description Record length Taxon Method Amplicon size Match details
A18053.1 emblrelpat DNA for transforming monocotyledono... 4883 bp synthetic construct QL-CON-00-015 136 bp View
A23334.1 emblrelpat PVE108 plasmid DNA 5620 bp Escherichia coli QL-CON-00-015 136 bp View
A23633.1 emblrelpat Plasmid pVE149 6376 bp unidentified QL-CON-00-015 136 bp View
A60109.1 emblrelpat Sequence 2 from Patent WO9706267. 6548 bp Plasmid PTS172 QL-CON-00-015 136 bp View
A60111.1 emblrelpat Sequence 4 from Patent WO9706267. 6291 bp Transformation vector pVE136 QL-CON-00-015 136 bp View
A71437.1 emblrelpat Sequence 7 from Patent WO9810081. 5349 bp unidentified QL-CON-00-015 136 bp View
A71440.1 emblrelpat Sequence 10 from Patent WO9810081. 5611 bp unidentified QL-CON-00-015 136 bp View
A75886.1 emblrelpat Sequence 1 from Patent WO9321335. 4883 bp unidentified QL-CON-00-015 136 bp View
A76916.1 emblrelpat Sequence 2 from Patent EP0757102. 6548 bp Plasmid PTS172 QL-CON-00-015 136 bp View
AB003141.1 nt Arabidopsis thaliana transgenic lin... 4475 bp Arabidopsis thaliana QL-CON-00-015 106 bp View
AB003141.1 emblreltgn Arabidopsis thaliana transgenic lin... 4475 bp Arabidopsis thaliana QL-CON-00-015 106 bp View
AF218816.1 nt Cloning vector pEGAD, complete sequ... 12594 bp Cloning vector pEGAD QL-CON-00-015 103 bp View
AR007513.1 emblrelpat Sequence 3 from patent US 5750867. 5620 bp unidentified QL-CON-00-015 136 bp View
AR007527.1 emblrelpat Sequence 17 from patent US 5750867. 4808 bp unidentified QL-CON-00-015 136 bp View
AR084079.1 emblrelpat Sequence 3 from patent US 5977433. 5620 bp unidentified QL-CON-00-015 136 bp View
AR084093.1 emblrelpat Sequence 17 from patent US 5977433. 4808 bp unidentified QL-CON-00-015 136 bp View
AR095109.1 emblrelpat Sequence 4 from patent US 6002070. 4883 bp unidentified QL-CON-00-015 136 bp View
AR098308.1 emblrelpat Sequence 2 from patent US 6074876. 6548 bp unidentified QL-CON-00-015 136 bp View
AR098310.1 emblrelpat Sequence 4 from patent US 6074876. 6291 bp unidentified QL-CON-00-015 136 bp View
AR098315.1 emblrelpat Sequence 4 from patent US 6074877. 4883 bp unidentified QL-CON-00-015 136 bp View

Related publications:

  • Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
  • Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.