European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 7034 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
OR726996.1 nt Eremophila magnifica subsp. magnifi... 151764 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 557 bp View
OR726997.1 nt Eremophila magnifica subsp. velutin... 151756 bp Eremophila magnifica subsp. velutina QL-PLN-00-007 557 bp View
OR726998.1 nt Eremophila magnifica subsp. velutin... 151755 bp Eremophila magnifica subsp. velutina QL-PLN-00-007 557 bp View
OR726999.1 nt Eremophila magnifica subsp. magnifi... 151751 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 557 bp View
OR727000.1 nt Eremophila magnifica subsp. magnifi... 151750 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 557 bp View
OR727001.1 nt Eremophila magnifica subsp. magnifi... 151731 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 557 bp View
OR727002.1 nt Eremophila magnifica subsp. magnifi... 151752 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 557 bp View
OR727003.1 nt Eremophila magnifica subsp. velutin... 151757 bp Eremophila magnifica subsp. velutina QL-PLN-00-007 557 bp View
OR727004.1 nt Eremophila magnifica subsp. velutin... 151756 bp Eremophila magnifica subsp. velutina QL-PLN-00-007 557 bp View
OR727005.1 nt Eremophila magnifica subsp. magnifi... 151750 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 557 bp View
OR727006.1 nt Eremophila magnifica subsp. magnifi... 151789 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 558 bp View
OR727007.1 nt Eremophila magnifica subsp. magnifi... 151752 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 557 bp View
OR727008.1 nt Eremophila magnifica subsp. magnifi... 151761 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 558 bp View
OR727009.1 nt Eremophila magnifica subsp. magnifi... 151806 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 558 bp View
OR727010.1 nt Eremophila magnifica subsp. magnifi... 151763 bp Eremophila magnifica subsp. magnifica QL-PLN-00-007 558 bp View
OR727011.1 nt Eremophila magnifica subsp. velutin... 151764 bp Eremophila magnifica subsp. velutina QL-PLN-00-007 558 bp View
OR727012.1 nt Eremophila magnifica subsp. velutin... 151769 bp Eremophila magnifica subsp. velutina QL-PLN-00-007 558 bp View
OR727014.1 nt Eremophila naaykensii isolate BMR06... 151741 bp Eremophila naaykensii QL-PLN-00-007 568 bp View
OR727015.1 nt Eremophila sp. (in: birds) isolate ... 151766 bp Eremophila sp. (in: birds) QL-PLN-00-007 557 bp View
OR730796.1 nt Persicaria capitata voucher THL chl... 160070 bp Persicaria capitata QL-PLN-00-007 592 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.