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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 7034 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
KP698990.1 nt Vicia ramuliflora isolate L-F_BY2 t... 684 bp Vicia ramuliflora QL-PLN-00-007 526 bp View
KP698991.1 nt Vicia japonica isolate L-F_DF1 tRNA... 684 bp Vicia japonica QL-PLN-00-007 526 bp View
KP698992.1 nt Vicia japonica isolate L-F_DF3 tRNA... 684 bp Vicia japonica QL-PLN-00-007 526 bp View
KP698993.1 nt Vicia japonica isolate L-F_DF4 tRNA... 684 bp Vicia japonica QL-PLN-00-007 526 bp View
KP698994.1 nt Vicia japonica isolate L-F_DF5 tRNA... 684 bp Vicia japonica QL-PLN-00-007 526 bp View
KP698995.1 nt Vicia multicaulis isolate L-F_DJ1 t... 684 bp Vicia multicaulis QL-PLN-00-007 526 bp View
KP698996.1 nt Vicia multicaulis isolate L-F_DJ2 t... 684 bp Vicia multicaulis QL-PLN-00-007 526 bp View
KP698997.1 nt Vicia multicaulis isolate L-F_DJ3 t... 684 bp Vicia multicaulis QL-PLN-00-007 526 bp View
KP698998.1 nt Vicia multicaulis isolate L-F_DJ4 t... 684 bp Vicia multicaulis QL-PLN-00-007 526 bp View
KP698999.1 nt Vicia pseudo-orobus isolate L-F_DY1... 684 bp Vicia pseudo-orobus QL-PLN-00-007 526 bp View
KP699000.1 nt Vicia pseudo-orobus isolate L-F_DY2... 684 bp Vicia pseudo-orobus QL-PLN-00-007 526 bp View
KP699001.1 nt Vicia pseudo-orobus isolate L-F_DY3... 684 bp Vicia pseudo-orobus QL-PLN-00-007 526 bp View
KP699002.1 nt Vicia pseudo-orobus isolate L-F_DY4... 684 bp Vicia pseudo-orobus QL-PLN-00-007 526 bp View
KP699003.1 nt Vicia pseudo-orobus isolate L-F_DY5... 684 bp Vicia pseudo-orobus QL-PLN-00-007 526 bp View
KP699009.1 nt Vicia amurensis isolate L-F_HLJ1 tR... 679 bp Vicia amurensis QL-PLN-00-007 521 bp View
KP699010.1 nt Vicia amurensis isolate L-F_HLJ2 tR... 679 bp Vicia amurensis QL-PLN-00-007 521 bp View
KP699011.1 nt Vicia amurensis isolate L-F_HLJ3 tR... 679 bp Vicia amurensis QL-PLN-00-007 521 bp View
KP699012.1 nt Vicia amurensis isolate L-F_HLJ4 tR... 679 bp Vicia amurensis QL-PLN-00-007 521 bp View
KP699013.1 nt Vicia amurensis isolate L-F_HLJ5 tR... 679 bp Vicia amurensis QL-PLN-00-007 521 bp View
KP699014.1 nt Vicia amoena isolate L-F_SY1 tRNA-L... 684 bp Vicia amoena QL-PLN-00-007 526 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.