Amplicon details |
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Amplicon: |
542 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcctgtttt ccgaaaccaa aggttcagaa 151 agtgaaaaag ggataggtgc agagactcaa tggaagctgt tctaacaaat 201 ggagttggct gcgttagtag agaaatcttt ccatcgaaaa ttccgaaagg 251 ataaaacgta tacgtattga atactatatc aaatgattaa tgacgactcg 301 actgaatctg tattttttat atgaaaatgg aagaatagat tccacattga 351 agaaagaatc gaatattcat tgattaaatg attcactcca tagtctgata 401 gatcttttca agaattgatt aatcggacga gaataaagat agagtcccgt 451 tctacatgtc aatgtcggca acaatgaaat ttatagtaag aggaaaatcc 501 gtcgacttta aaaatcgtga gggttcaagt ccctctatcc cc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| AJ620161.1 | nt | Psydrax obovata chloroplast trnT-tr... | 1655 bp | Psydrax obovata | QL-PLN-00-007 | 542 bp | View |
| AJ620164.1 | nt | Psydrax sp. A Luke and Luke 9031 ch... | 1666 bp | Psydrax sp. A Luke & Luke 9031 | QL-PLN-00-007 | 542 bp | View |
| JQ958213.1 | nt | Psydrax fragrantissima voucher Lema... | 1628 bp | Psydrax fragrantissima | QL-PLN-00-007 | 542 bp | View |
| JQ958216.1 | nt | Psydrax locuples voucher Lemaire & ... | 1649 bp | Psydrax locuples | QL-PLN-00-007 | 542 bp | View |
| KY378666.1 | nt | Psydrax obovata chloroplast, partia... | 126993 bp | Psydrax obovata | QL-PLN-00-007 | 542 bp | View |
| JQ958215.1 | nt | Psydrax livida voucher Lemaire & Ve... | 1637 bp | Psydrax livida | QL-PLN-00-007 | 542 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.