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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_CS592100 nrnl1 Sequence 820 from Patent WO20070356... 2719 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS592100 nrnl1 Sequence 820 from Patent WO20070356... 2719 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS592101 nrnl1 Sequence 821 from Patent WO20070356... 2367 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS592101 nrnl1 Sequence 821 from Patent WO20070356... 2367 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS632968 nrnl1 Sequence 3 from Patent WO2007056347... 7701 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS632975 nrnl1 Sequence 10 from Patent WO200705634... 8724 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646699 nrnl1 Sequence 41 from Patent WO200705907... 8615 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646701 nrnl1 Sequence 43 from Patent WO200705907... 9522 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646707 nrnl1 Sequence 49 from Patent WO200705907... 8312 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646708 nrnl1 Sequence 50 from Patent WO200705907... 8137 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646709 nrnl1 Sequence 51 from Patent WO200705907... 11934 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646710 nrnl1 Sequence 52 from Patent WO200705907... 9779 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646782 nrnl1 Sequence 37 from Patent WO200706184... 7873 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646791 nrnl1 Sequence 46 from Patent WO200706184... 8671 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646797 nrnl1 Sequence 52 from Patent WO200706184... 12323 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646798 nrnl1 Sequence 53 from Patent WO200706184... 12456 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646799 nrnl1 Sequence 54 from Patent WO200706184... 9088 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646836 nrnl1 Sequence 91 from Patent WO200706184... 11740 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646840 nrnl1 Sequence 95 from Patent WO200706184... 8138 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS646841 nrnl1 Sequence 96 from Patent WO200706184... 7085 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.