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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon finder

1) Select detection method(s) *

Note: if more than one method is selected, only records that produce amplicons with all those methods will be shown
Event-specific
Construct-specific
Element-specific
Taxon-specific

2) Optionally select also negative method(s)

Note: If you select methods here, records that produce amplicons with any of those methods will be removed

3) Select database(s) *
 nt GenBank nt section (NCBI)
 emblreltgn ENA transgenic data class division (EMBL-EBI)
 emblrelpat ENA patent data class division (EMBL-EBI)
 nrnl1 Non-redundant patent nucleotide database level-1 (EMBL-EBI)

4) Select the maximum number of gaps/mismatches
Gaps:
Mismatches:
* required field

Results : 13333 amplicons

Restrict to taxon(s):

Too many unique records to show the Unique Records page (max: 500)


Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_CS182458 nrnl1 Sequence 2 from Patent WO2005097999. 10870 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS183150 nrnl1 Sequence 3 from Patent WO2005098004. 12682 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS204053 nrnl1 Sequence 6 from Patent EP1598423. ... 2805 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS249132 nrnl1 Sequence 4 from Patent WO2005121347... 7085 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS249133 nrnl1 Sequence 5 from Patent WO2005121347... 5303 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS249134 nrnl1 Sequence 6 from Patent WO2005121347. 8031 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS249135 nrnl1 Sequence 7 from Patent WO2005121347... 8031 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS249138 nrnl1 Sequence 10 from Patent WO2005121347. 8642 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS249197 nrnl1 Sequence 69 from Patent WO2005121347. 8031 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS249198 nrnl1 Sequence 70 from Patent WO200512134... 9616 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS249477 nrnl1 Sequence 2 from Patent EP1614754. ... 3391 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS249477 nrnl1 Sequence 2 from Patent EP1614754. ... 3391 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS249478 nrnl1 Sequence 3 from Patent EP1614754. ... 4534 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS249478 nrnl1 Sequence 3 from Patent EP1614754. ... 4534 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS323767 nrnl1 Sequence 3 from Patent WO2006004675... 10808 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS323767 nrnl1 Sequence 3 from Patent WO2006004675... 10808 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS353195 nrnl1 Sequence 44 from Patent WO200606920... 4276 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS376390 nrnl1 Sequence 4 from Patent WO2006074956. 10443 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS376391 nrnl1 Sequence 5 from Patent WO2006074956. 6082 bp unidentified QL-ELE-00-012 82 bp View
NRN_CS376392 nrnl1 Sequence 6 from Patent WO2006074956. 6085 bp unidentified QL-ELE-00-012 82 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.