Amplicon details |
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Amplicon: |
540 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tagtatggaa 51 acctactaag tgctaacttt caaattcaga gaaaccctgg aattaataaa 101 aaagggcaat cctgagccaa atcctctttt cgcaagataa aggttcagaa 151 aacgaaaaag ggataggtgc agagactcaa tggaagctgt tctaacttgg 201 ctgcattggt agaggaatcg ttccatcaaa acttccgaaa ggaaaaatct 251 atctattgaa tattatatca acagattaga tggcgcacat ctgtattttg 301 tatttgtatt tttttatatg caaaatggaa gaattgatgt gaattgattc 351 cacattgaag aacgagtcga atattcattt attcattcac caaacatcaa 401 atcattcact ccatagtcta gcggacgaga ataaagatag agtcccattc 451 cacatgtcaa taccggcaac aatgaaattt ttagtaagag gaaaatccgt 501 cgacttttaa aatcgtgagg gttcaagtcc ctctatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MK833947.1 | nt | Dicliptera ruiziana chloroplast, co... | 150750 bp | Dicliptera ruiziana | QL-PLN-00-007 | 540 bp | View |
| MK830556.1 | nt | Dicliptera acuminata chloroplast, c... | 150738 bp | Dicliptera acuminata | QL-PLN-00-007 | 540 bp | View |
| MK833945.1 | nt | Dicliptera peruviana chloroplast, c... | 150811 bp | Dicliptera peruviana | QL-PLN-00-007 | 540 bp | View |
| MK833946.1 | nt | Dicliptera montana chloroplast, com... | 150689 bp | Dicliptera montana | QL-PLN-00-007 | 540 bp | View |
| MK848596.1 | nt | Dicliptera mucronata chloroplast, c... | 150720 bp | Dicliptera mucronata | QL-PLN-00-007 | 540 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.