Amplicon details

Amplicon:

532 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc cctttttttg aaaaaacaag cggttctcaa
151   actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaacgaatc gaagtaataa cgattaatca cagaacccat attataatta
251   taatataggt tctttatttt atttttagaa tgcaatttgg aaggattatg
301   aaatagaaaa ttcataattt ttttagaatt attgtgaatc tattccaatc
351   gaatattgag taatcaaatc cttcaattca ttgttttcga gatcttttaa
401   aaagtggatt aatcggacga ggataaagag agagtcccat tctacatgtc
451   aatactgaca acaatgaaat ttctagtaaa aggaaaatcc gtcgacttta
501   taagtcgtga gggttcaagt ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MH181184.1 nt Andropogon abyssinicus isolate TK36... 138679 bp Andropogon abyssinicus QL-PLN-00-007 532 bp View
MH181187.1 nt Andropogon abyssinicus isolate TK36... 138700 bp Andropogon abyssinicus QL-PLN-00-007 532 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.