Amplicon details

Amplicon:

582 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ctttttccga aaacaaaaaa aaagggtagg
151   tgcagagact caatggaaga tgttctaaca aatggagttg actacgttgc
201   gttagtaaag gaatgaatcc ttctatcgaa actccagaaa agatgaaaga
251   taaacgtatt acgtacggaa atactatttg attaatgaca acccgaatct
301   ctattttttt tttttataaa aaattatata taaaaatgaa cgaattgttc
351   tgaatcgatt ccaatatctc caagttgaaa aaagaatcga atattcattg
401   atcaaatcat ttactccatc atacatagtc tgatagatct tttgaagaac
451   taattaatca gatgcgaata gaataaagat agagtcccat tctacatgtc
501   aataccgaca aaaatgaaat ttctagtaag aggaaaatcc gtcgactttt
551   aaaatcgtga gggttcaagt ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MH394426.1 nt Hodgsonia macrocarpa chloroplast, p... 156120 bp Hodgsonia macrocarpa QL-PLN-00-007 582 bp View
MH394429.1 nt Hodgsonia macrocarpa chloroplast, p... 155055 bp Hodgsonia macrocarpa QL-PLN-00-007 582 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.