Amplicon details |
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Amplicon: |
617 bp | |
1 cgaaatcggt agacgctacg gacttgatta gattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaat 101 gggcaatcct gagccaaatc tttatgttaa gaaaacaaag gataggtgca 151 gagactcaat ggaagctgtt ctaacaaatg gaattgacgt tgactacgtt 201 gcgttggtag ctggaatccc tctatcgaaa ttacagaaag gatgacccta 251 tatgcgtata tatacatact gacatatcaa acgattaatc acaactcgaa 301 tctggaatcc atattattaa ctataactat atattatagt tattattata 351 gatatatttt tatataaatt tatagattaa ttaagagtta ttataaatat 401 attccagtcg aagttgaagg aagaatcgaa tattcagtat tcagtgatca 451 aatcattcat tccggagtcg gatagatctt ttgaaaaaaa tgattaatcg 501 gacgagaata aagagagagt cctgttctac gtgtcaatac cgacagcaat 551 gaaatttata gtattaggaa aatccgtcga ctttagaaat cgtgagggtt 601 caagtccctc tatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| KT897736.1 | nt | Colchicum triphyllum voucher E. Kay... | 1020 bp | Colchicum triphyllum | QL-PLN-00-007 | 617 bp | View |
| KT897760.1 | nt | Colchicum triphyllum voucher E. Kay... | 1020 bp | Colchicum triphyllum | QL-PLN-00-007 | 617 bp | View |
| KT897779.1 | nt | Colchicum sanguicolle voucher E. Ka... | 1023 bp | Colchicum sanguicolle | QL-PLN-00-007 | 617 bp | View |
| KT897843.1 | nt | Colchicum triphyllum voucher E. Kay... | 1022 bp | Colchicum triphyllum | QL-PLN-00-007 | 617 bp | View |
| KT897860.1 | nt | Colchicum sanguicolle voucher E. Ka... | 1021 bp | Colchicum sanguicolle | QL-PLN-00-007 | 617 bp | View |
| KY860495.1 | nt | Colchicum triphyllum voucher E. Kay... | 1025 bp | Colchicum triphyllum | QL-PLN-00-007 | 617 bp | View |
| KY860507.1 | nt | Colchicum triphyllum voucher E. Kay... | 1023 bp | Colchicum triphyllum | QL-PLN-00-007 | 617 bp | View |
| KY860509.1 | nt | Colchicum triphyllum voucher E. Kay... | 1023 bp | Colchicum triphyllum | QL-PLN-00-007 | 617 bp | View |
| KY860482.1 | nt | Colchicum decaisnei voucher E. Kaya... | 1023 bp | Colchicum decaisnei | QL-PLN-00-007 | 617 bp | View |
| KY860487.1 | nt | Colchicum serpentinum voucher E. Ka... | 1024 bp | Colchicum serpentinum | QL-PLN-00-007 | 617 bp | View |
| KY860497.1 | nt | Colchicum triphyllum voucher E. Kay... | 1025 bp | Colchicum triphyllum | QL-PLN-00-007 | 617 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.