Amplicon details

Amplicon:

603 bp
1     cgaaatcggt agacgctacg gacttaagtg tattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aaaaaaaaaa
101   tgggcaatcc tgagccaaat cctgttttac gagaataaaa aaaggttcaa
151   aaagcaagaa aaaaaatagg ataggtgcag agactcaatg gaagttgttc
201   gaacaaatgg ggttgactgc ttttgcgttg gtaaaagaat acttctatcg
251   aaactccagc aaggataaac atatagaata cgtaatgaaa aactatctca
301   aaaaagacga ctggggcacc tattcttttg atttgtttat aggttatagc
351   aaaaagaatt atatgcaaaa tcaaaagaaa agaatcgttg tgaatcgatt
401   ccaagttgaa gaatagaata ttcattaata aaaccattca ctccatagtc
451   tgataaatct tttgaaaaac ggattaatcg gacgagaata aagatagagt
501   cccgttctac atgtcaatat caataccgac aacaatgaaa tttatagtaa
551   gaggaaaatc cgtcgacttt aaaaatcgtg agggttcaag tccctctatc
601   ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KY972762.1 nt Pakaraimaea dipterocarpacea isolate... 1881 bp Pakaraimaea dipterocarpacea QL-PLN-00-007 603 bp View
KY972763.1 nt Pakaraimaea dipterocarpacea isolate... 1881 bp Pakaraimaea dipterocarpacea QL-PLN-00-007 603 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.