Amplicon details |
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Amplicon: |
616 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc ccttttttga aaaaacaagt ggttctcaaa 151 ctagaaccca aatgaaaagg ataggtgcag agactcaatg gaagctattc 201 taacgaatcg aggtgtaatt acgttgtgtt ggtaatgaaa ctccctctaa 251 atttgagaaa gaagggcttt atacatctaa tacacacgta tagatactga 301 catagcaaac gattaatcac agaacccata tcataatata ggttctttat 351 ttatttttta gaatgaaatt aggaatgatt atgaaataga aaattctgaa 401 ttttgattag aattattgtg aatccattcc actcgaatat tgagtaatca 451 aatccttcaa ttcattgttt ttgagatctt ttaaaaagag gattaatcgg 501 acgaggataa agagagagtc ccattctaca tgtcaatact gacaacaatg 551 aaatttctag taaaaggaaa atccgtcgac tttataagtc gtgagggttc 601 aagtccctct atcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MF035981.1 | nt | Eragrostis tef isolate SRR1463402 c... | 134310 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN780987.1 | nt | Eragrostis tef isolate T66-2 plasti... | 134350 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN780988.1 | nt | Eragrostis tef isolate T81-1 plasti... | 134412 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN780990.1 | nt | Eragrostis tef isolate T56-2 plasti... | 134351 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN780991.1 | nt | Eragrostis tef isolate T36-1 plasti... | 134350 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN780992.1 | nt | Eragrostis tef isolate t20 chloropl... | 134351 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN780993.1 | nt | Eragrostis tef isolate T24-2 plasti... | 134421 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN780994.1 | nt | Eragrostis tef isolate T43-2 plasti... | 134419 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN780995.1 | nt | Eragrostis tef isolate T12-1 chloro... | 134352 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN780996.1 | nt | Eragrostis tef isolate t51 chloropl... | 134422 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN780998.1 | nt | Eragrostis tef isolate t100 chlorop... | 134350 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN780999.1 | nt | Eragrostis tef isolate t49 chloropl... | 134349 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN781000.1 | nt | Eragrostis tef isolate T74-2 plasti... | 134349 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN781001.1 | nt | Eragrostis tef isolate T90-2 plasti... | 134350 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN781002.1 | nt | Eragrostis tef isolate t69 chloropl... | 134351 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN781003.1 | nt | Eragrostis tef isolate T1-2 plastid... | 134350 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN781004.1 | nt | Eragrostis tef isolate T11-2 plasti... | 134352 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN781006.1 | nt | Eragrostis tef isolate t15 chloropl... | 134418 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN781007.1 | nt | Eragrostis tef isolate t3 chloropla... | 134437 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
| MN781008.1 | nt | Eragrostis tef isolate T115-1 plast... | 134414 bp | Eragrostis tef | QL-PLN-00-007 | 616 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.