Amplicon details

Amplicon:

610 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc ccttttttga aaaaataagt ggttgtcaaa
151   ctaaaaccca aaggaaaagg ataggtgcag agactcaatg gaagctgttc
201   taacgaatcg aagtaattac gttgtgttgg tagtgtaact ccctggaaat
251   tagagaaaga agggcacatc taatacacac gtatagatac tgacatagca
301   aacgattaat cacggaaccc atatcctaat ataggttctt tttttttatt
351   ttttagaatg aaattaggaa tgattatgaa atagaaaatt ctgaattttt
401   ttagaattat tgtgaatcca ttccaatcga atattgagta atcaaatcct
451   tcaattcatt gttttcgaga tctttaaaaa agtggattaa tcgaacgagg
501   ataaagagag agtcccattc tacatgtcaa tactgacaac aatgaaattt
551   ctagtaaaag gaaaatccgt cgactttata agtcgtgagg gttcaagtcc
601   ctctatcccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KX752086.1 nt Alloteropsis semialata isolate Asem... 139660 bp Alloteropsis semialata QL-PLN-00-007 610 bp View
KX752088.1 nt Alloteropsis semialata isolate Asem... 139650 bp Alloteropsis semialata QL-PLN-00-007 610 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.