Amplicon details

Amplicon:

620 bp
1     cgaaatcggt agacgctacg gacttaattg gattgggcct tggtatggaa
51    acctgctgag tgagagcttt caaattcaga gaaaccctgg aattaataaa
101   aaggggtaat cctgagccaa atcctatttt tcgaaaacaa aggtttagaa
151   agtgaaaaag ggataggtgc agagactcaa tggaagctgt tctaacaaat
201   ggagttcgct gtgttagtcg ataattcttt ccatcaaaaa ctcagaaaat
251   acaactacta agtattaagt gaaggataaa cgtatatact atccatacgt
301   agtgagtagt atattttata ttaaattttt aaaattatta aatgagtaat
351   gacagcccca atgaatctat actttttcat agaaaaaatt atagaattgt
401   aattgttgtt aaaatattcc acgtttaaga aagaatctaa tattcattta
451   tcaaatgatt cactccacag tccgatagat ctttttacga acttattaat
501   cggacgagaa taaagataga gtcccgttct acatgtcaat gccggcaaca
551   atgaaattta tagttaagag gaaaatccgt cgacttttaa aatcgtgagg
601   gttcaagtcc ctctatcccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OY787633.1 nt Cruciata laevipes genome assembly, ... 31028921 bp Cruciata laevipes QL-PLN-00-007 620 bp View
OY787645.1 nt Cruciata laevipes genome assembly, ... 153225 bp Cruciata laevipes QL-PLN-00-007 620 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.