JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

569 bp

1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggtaat cctgagccaa atcccgtttt ctcaaaacaa aggtaaaggt
151   tcaaaaaacg aaaaaaagga taggtgcaga gactcaatgg aagctgttct
201   aacaaatgga gttgattgcc ctggtagagg catctttgca tggaaacttc
251   cgaaaggatg aaggataaat gtatctattg aatactatat cattaatgat
301   taatgatggt ccgaatctgt atttgtattt tttaatatga aaaatgtaag
351   aattgatgtg aattgattcc acattgaaga aaaaatcgaa tattcagtca
401   gcaaatgatt cactccatag tccaatagat cttttaaaga actgattaat
451   cggacgagaa taaagataga gtcccattct acatgtcaat accggcaaca
501   atgaaattta tagtaagagg aaaatccgtc gactttaaaa atcgtgaggg
551   ttcaagtccc tctatcccc

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
OR699041.1	nt	Prostanthera althoferi subsp. altho...	152865 bp	Prostanthera althoferi subsp. althoferi	QL-PLN-00-007	569 bp	View
OR699049.1	nt	Prostanthera althoferi subsp. altho...	152871 bp	Prostanthera althoferi subsp. althoferi	QL-PLN-00-007	569 bp	View
OR699042.1	nt	Prostanthera althoferi subsp. altho...	152886 bp	Prostanthera althoferi subsp. althoferi	QL-PLN-00-007	569 bp	View
OR699046.1	nt	Prostanthera althoferi subsp. altho...	152878 bp	Prostanthera althoferi subsp. althoferi	QL-PLN-00-007	569 bp	View
OR699052.1	nt	Prostanthera althoferi subsp. altho...	152870 bp	Prostanthera althoferi subsp. althoferi	QL-PLN-00-007	569 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.