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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 605 bp 
1     cgaaatcggt agacgctacg gacttgatta aattgagcct tggtatggaa
51    acctgctaag tgataacttc caaattcaga gaaaccccgg aattaaaaat
101   gggcaatcct gagccaaatc tttattttga gaaaaagggt ttaatttata
151   gtttttataa tataaaacta caataaaaaa agataggtgc agagactcaa
201   tggaagctgt tctaacgaat gaagttgatt acgttgcgct ggtagccgga
251   atccttctat caaaattacg gagaggatgc ccgccctata tacgtatata
301   tacatattga catagtaaac gattgattaa tcgcggcccg aatccattat
351   aatatatata tgaaaaatat aagagttatt gtaaatctat tccatattcc
401   aatcaaagtt taaggaagaa tcgaatattc agtgatcaaa ttattcattc
451   cagagtctgt atagatcttt ttaaaaactg attattcgga cgagaataaa
501   gagagagtcc cattctacgt gtcaataccg acaacaatga aatttatagt
551   aaaaggaaaa tccgtcgact ttataagtcg tgagggttca agtccctcta
601   tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OR723982.1 nt Fritillaria usuriensis isolate HLJY... 151525 bp Fritillaria usuriensis QL-PLN-00-007 605 bp View
OR723984.1 nt Fritillaria usuriensis isolate HLJY... 151515 bp Fritillaria usuriensis QL-PLN-00-007 605 bp View
OR723983.1 nt Fritillaria usuriensis isolate HLJG... 151527 bp Fritillaria usuriensis QL-PLN-00-007 605 bp View
OR723985.1 nt Fritillaria usuriensis isolate JLPS... 151542 bp Fritillaria usuriensis QL-PLN-00-007 605 bp View
OR723986.1 nt Fritillaria usuriensis isolate LNFS... 151548 bp Fritillaria usuriensis QL-PLN-00-007 605 bp View
MH593367.1 nt Fritillaria usuriensis isolate GZDQ... 151571 bp Fritillaria usuriensis QL-PLN-00-007 605 bp View
MH593368.1 nt Fritillaria usuriensis isolate GZDQ... 151523 bp Fritillaria usuriensis QL-PLN-00-007 605 bp View
MH593369.1 nt Fritillaria usuriensis isolate GZDQ... 151552 bp Fritillaria usuriensis QL-PLN-00-007 605 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.