Amplicon details

Amplicon:

584 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tagtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aactaaaaat
101   gggcaatcct gagccaaatc tttttttttc aaaaaaggtt tttttttgaa
151   actcgaataa aaaaagatag gtgcagagac tcaatggaag ctgttctaac
201   gaatggagtt gactacgttg tgttggtagc cggaatcctt ctatcgaaat
251   taaaaaaagg atgactatat atctaataaa tacgtataca tactgacata
301   tcaaacgatt aatcatgacc cgaattagta ttatatatat gcaaaattca
351   gagttattgt ggatctattc caatcgaagt tgaaggaaga acagaatatt
401   taatgatcaa atcattcatt ccagggtttg ataggccttt actttttttt
451   gacaaactga ttaatcggac gagaataaag agagagtccc attctacatg
501   tcaataccga caacaatgaa atttatagta agaggaaaat ccgtcgactt
551   taaaaatcgt gagggttcaa gtccctctat cccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OR260131.1 nt Hemerocallis hybrid cultivar cultiv... 156060 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260139.1 nt Hemerocallis hybrid cultivar cultiv... 156057 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260126.1 nt Hemerocallis altissima isolate 46 c... 156119 bp Hemerocallis altissima QL-PLN-00-007 584 bp View
OR260127.1 nt Hemerocallis citrina isolate 47 chl... 156053 bp Hemerocallis citrina QL-PLN-00-007 584 bp View
OR260132.1 nt Hemerocallis hybrid cultivar cultiv... 156053 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260133.1 nt Hemerocallis hybrid cultivar cultiv... 156053 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260134.1 nt Hemerocallis hybrid cultivar cultiv... 156053 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260135.1 nt Hemerocallis sp. isolate 72 cultiva... 156053 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260136.1 nt Hemerocallis hybrid cultivar cultiv... 156053 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260138.1 nt Hemerocallis hybrid cultivar cultiv... 156053 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260140.1 nt Hemerocallis hybrid cultivar cultiv... 156053 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260142.1 nt Hemerocallis hybrid cultivar cultiv... 156060 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260144.1 nt Hemerocallis sp. isolate 87 cultiva... 156053 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260168.1 nt Hemerocallis hybrid cultivar cultiv... 156060 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260169.1 nt Hemerocallis hybrid cultivar cultiv... 156053 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260170.1 nt Hemerocallis hybrid cultivar isolat... 156053 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260175.1 nt Hemerocallis hybrid cultivar isolat... 156051 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View
OR260177.1 nt Hemerocallis hybrid cultivar cultiv... 156060 bp Hemerocallis hybrid cultivar QL-PLN-00-007 584 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.