Amplicon details |
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Amplicon: |
559 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcccgtttt ccgaaaccaa aggttcataa 151 agtgaaaaaa ggataggtgc agagactcaa cggaagctgt tctaacaaat 201 ggagttggct gcgttagtag agaaatcttt ccatctaaaa ttccgaaagg 251 ataaagtaac gtatatatac gtattgaata ctatatcaaa tgattaatga 301 ggactcgact gaatctgtat tttttatatg aaaacggaag aattggtgtg 351 aatagattcc acattgaaga aagaatcgaa tattcattga tcaaatgatt 401 cactccatag tctgatagat cttttcaaga attgattaat cggacgagaa 451 taaagataga gtcccattct acatgtcaat gtcggcaaca attaaattta 501 tagtaaaagg aaaatccgtc gactttaaaa atcgtgaggg ttcaagtccc 551 tctatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| FM207112.1 | nt | Alberta minor chloroplast trnT-trnL... | 1686 bp | Razafimandimbisonia minor | QL-PLN-00-007 | 559 bp | View |
| FM207114.1 | nt | Alberta sambiranensis chloroplast t... | 1705 bp | Razafimandimbisonia sambiranensis | QL-PLN-00-007 | 559 bp | View |
| FM207115.1 | nt | Alberta sp. Eriksson et al. 928 chl... | 1700 bp | Razafimandimbisonia sp. 1 Eriksson et al. 928 | QL-PLN-00-007 | 559 bp | View |
| FM207117.1 | nt | Alberta cf. humblotii Eriksson et a... | 1651 bp | Razafimandimbisonia cf. humblotii Eriksson et al. 1027 | QL-PLN-00-007 | 559 bp | View |
| FM207109.1 | nt | Alberta humblotii chloroplast trnT-... | 1212 bp | Razafimandimbisonia humblotii | QL-PLN-00-007 | 559 bp | View |
| FM207111.1 | nt | Alberta sp. Eriksson et al. 904 chl... | 1646 bp | Razafimandimbisonia sp. 2 Eriksson et al. 904 | QL-PLN-00-007 | 559 bp | View |
| KM592145.1 | nt | Razafimandimbisonia humblotii vouch... | 1692 bp | Razafimandimbisonia humblotii | QL-PLN-00-007 | 559 bp | View |
| EU817474.1 | nt | Alberta sambiranensis trnT-trnL int... | 1671 bp | Razafimandimbisonia sambiranensis | QL-PLN-00-007 | 559 bp | View |
| FM207116.1 | nt | Alberta sambiranensis chloroplast t... | 1701 bp | Razafimandimbisonia sambiranensis | QL-PLN-00-007 | 559 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.