Amplicon details

Amplicon:

568 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   agcgaaaaaa aaaaggatag gtgcagagac tcaatggaag ctgttctaac
201   aaatggagtt gactgcgttg gtagaggaat ctttccatcg aaacttcaga
251   aagaaaggat gaaggataaa ggtatatatt gaatactata tcaaatgatt
301   aatgatggcc ctaatctgta tctgtatttt tttatatgaa aaatggaaga
351   attggtatga agtgattcca cattgaagaa agaatcaaat attccttcat
401   caaatcattc actccacagt ctgatagttc ttttaaagaa ctgattaatc
451   ggacaagaat aaagatagag tcccattcta catgtcaata ttggcaacaa
501   tgcaatttat agtaagagga aaatccgtcg acttttaaag tcgtgagggt
551   tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT650214.1 nt Eremophila gilesii voucher MELUD119... 151996 bp Eremophila gilesii QL-PLN-00-007 568 bp View
OR743506.1 nt Eremophila cuneifolia isolate BMR07... 151774 bp Eremophila cuneifolia QL-PLN-00-007 568 bp View
OR743524.1 nt Eremophila fraseri subsp. fraseri i... 151776 bp Eremophila fraseri subsp. fraseri QL-PLN-00-007 568 bp View
OR727014.1 nt Eremophila naaykensii isolate BMR06... 151741 bp Eremophila naaykensii QL-PLN-00-007 568 bp View
OR743528.1 nt Eremophila fraseri subsp. fraseri i... 151796 bp Eremophila fraseri subsp. fraseri QL-PLN-00-007 568 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.