Amplicon details

Amplicon:

610 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ctttttccga aaacaaatca aataagggct
151   tcgaaagcga gaaaaaaaag ggtaggtgca gagactcaat ggaagctgtt
201   ctaacaaatg agttgactag gttgcgttag taaaggaatg aatccttcca
251   tcgaaactcc agaaaagatg aaagataaac gtatatacgt actgaaatac
301   tatttgatta atgacagccc gaatctctat tttttatagt tatctaaaaa
351   atgatatata tatataaaaa acgaattgtt attaatcgat tccaatatct
401   ccaggttgaa aaaagaatcg aatattcatt gatcaaatca tttactccat
451   catagtctga tagatctttt gaagaactga ttaatcagat gagaatagaa
501   taaagataga gtcccattct acatgtcaat accgacaaaa atgaaattta
551   tagtaagagg aaaatccgtc gacttaaaaa aatcgtgagg gttcaagtcc
601   ctctatcccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
ON872370.1 nt Gynostemma burmanicum (nom. inval.)... 157834 bp Gynostemma burmanicum (nom. inval.) QL-PLN-00-007 610 bp View
MN542403.1 nt Gynostemma 'burmanicum' chloroplast... 157153 bp Gynostemma burmanicum (nom. inval.) QL-PLN-00-007 610 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.