Amplicon details |
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Amplicon: |
564 bp | |
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa 51 acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa 101 aagggcaatc ctgagccaaa tcctgttttt cacaaacaaa ggttcagaaa 151 acgaaaacaa ggataggtgc agagactcaa cggaagctat tctaacaaat 201 ggagttggcc gcgttggtag agaaatcttt ccgtcgaaaa ttcagaaagg 251 atgaagtata aacgtatata catacgtatt gaatactata tcaaatgatt 301 aatgccaacc cgaatgaatc tgtatttttt ctataaaaac tggaagaatt 351 ggtgtgattc gattctttct tcaatgtgga atccaatatt cattgatcaa 401 atgattcact ccacagtctg tagatctttt caagaactga ttaatcggac 451 gagaataaag atagagtccc gttctacatg tcaatgctgg caacaatgaa 501 atttatagta agaggaaaat ccgtcgactt aaaaaatcgt gagggttcaa 551 gtccctctat cccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MW392089.1 | nt | Plumeria alba chloroplast, partial ... | 150270 bp | Plumeria alba | QL-PLN-00-007 | 564 bp | View |
| MW392092.1 | nt | Plumeria filifolia chloroplast, par... | 150393 bp | Plumeria filifolia | QL-PLN-00-007 | 564 bp | View |
| MW392094.1 | nt | Plumeria lanata chloroplast, partia... | 150376 bp | Plumeria lanata | QL-PLN-00-007 | 564 bp | View |
| MW392095.1 | nt | Plumeria magna chloroplast, partial... | 133694 bp | Plumeria magna | QL-PLN-00-007 | 564 bp | View |
| MW392096.1 | nt | Plumeria montana chloroplast, parti... | 122573 bp | Plumeria montana | QL-PLN-00-007 | 564 bp | View |
| MW392098.1 | nt | Plumeria subsessilis chloroplast, p... | 150053 bp | Plumeria subsessilis | QL-PLN-00-007 | 564 bp | View |
| MW392099.1 | nt | Plumeria tuberculata chloroplast, p... | 150145 bp | Plumeria tuberculata | QL-PLN-00-007 | 564 bp | View |
| MG963231.1 | nt | Plumeria cubensis chloroplast, part... | 124103 bp | Plumeria cubensis | QL-PLN-00-007 | 564 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.