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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 559 bp 
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgttgt ctcaaaacaa aggttcagaa
151   ggcgaaaaaa ggataggtgc agagactcaa tggaagctgt tctaacaaat
201   ggagttaact gcgttggtag cggaatcttt cgatcgaaac ttcagaaaga
251   gtgacggata aacgtatcta ttgaatacta tatcaaatga ttaatgatgg
301   accgaatctg tattttttta tatgaaaaat ggaaaaattg gtgtgaattt
351   attccacatt gaagaaagaa tcaaataaaa tattcattca tcaaatcatt
401   cactccatag tctgatagat cttttaaaga actgattaat cggacgagaa
451   taaagataga gtcccattct acatgtcaat accggcaaca atgaaattta
501   tagtaagagg aaaatccgtc gactttaaaa atcgtgaggg ttcaagtccc
551   tctatcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OP007359.1 nt Buddleja davidii chloroplast, compl... 154112 bp Buddleja davidii QL-PLN-00-007 559 bp View
OP007369.1 nt Buddleja alternifolia chloroplast, ... 154102 bp Buddleja alternifolia QL-PLN-00-007 559 bp View
OP007407.1 nt Buddleja crispa chloroplast, comple... 154083 bp Buddleja crispa QL-PLN-00-007 559 bp View
OP007343.1 nt Buddleja sp. GJ53 chloroplast, comp... 154289 bp Buddleja sp. GJ53 QL-PLN-00-007 559 bp View
OP007347.1 nt Buddleja crispa chloroplast, comple... 154317 bp Buddleja crispa QL-PLN-00-007 559 bp View
OP007351.1 nt Buddleja officinalis chloroplast, c... 154312 bp Buddleja officinalis QL-PLN-00-007 559 bp View
OP007352.1 nt Buddleja davidii chloroplast, compl... 154112 bp Buddleja davidii QL-PLN-00-007 559 bp View
OP007353.1 nt Buddleja davidii chloroplast, compl... 154145 bp Buddleja davidii QL-PLN-00-007 559 bp View
OP007361.1 nt Buddleja paniculata chloroplast, co... 154298 bp Buddleja paniculata QL-PLN-00-007 559 bp View
OP007362.1 nt Buddleja sp. GJ73 chloroplast, comp... 154290 bp Buddleja sp. GJ73 QL-PLN-00-007 559 bp View
OP007363.1 nt Buddleja sp. GJ74 chloroplast, comp... 154289 bp Buddleja sp. GJ74 QL-PLN-00-007 559 bp View
OP007370.1 nt Buddleja alternifolia chloroplast, ... 154089 bp Buddleja alternifolia QL-PLN-00-007 559 bp View
OP007371.1 nt Buddleja alternifolia chloroplast, ... 154396 bp Buddleja alternifolia QL-PLN-00-007 559 bp View
OP007374.1 nt Buddleja alternifolia chloroplast, ... 154366 bp Buddleja alternifolia QL-PLN-00-007 559 bp View
OP007389.1 nt Buddleja davidii chloroplast, compl... 154112 bp Buddleja davidii QL-PLN-00-007 559 bp View
OP007394.1 nt Buddleja davidii chloroplast, compl... 154113 bp Buddleja davidii QL-PLN-00-007 559 bp View
OP007396.1 nt Buddleja fallowiana chloroplast, co... 154130 bp Buddleja fallowiana QL-PLN-00-007 559 bp View
OP007398.1 nt Buddleja nivea chloroplast, complet... 154154 bp Buddleja nivea QL-PLN-00-007 559 bp View
OP007399.1 nt Buddleja paniculata chloroplast, co... 154272 bp Buddleja paniculata QL-PLN-00-007 559 bp View
OP007400.1 nt Buddleja paniculata chloroplast, co... 154412 bp Buddleja paniculata QL-PLN-00-007 559 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.