Amplicon details

Amplicon:

567 bp
1     cgaaatcggt agacgctacg gacttgatta aattgagcct tggtatggaa
51    acctgctaag tgataacttc caaattcaga gaaaccccgg aattaaaaat
101   gggcaatcct gagccaaatc tttttttttt ttcaaaaaaa aggataggtg
151   cagagactca atggaagctg ttctaacaaa tggagttgat tacgttacat
201   gcgctagtag ccggaatcct tctatcaaaa ttattgaaaa gatacccgcc
251   ctatatatgt agatatacat actcacatag taaacgattg attaatcgca
301   gcccaaatcc attatatatg aaaaatttaa gaatcattgt gaatctattc
351   cattcgatat tccaatcgaa gttggaggaa gaatcgaata ttaaatgatc
401   aaattattca ttccaaagtc tgatagatct tttgaaaaac cgattattcg
451   aacgagaata aagagagagt cccattctac gtgtcaatac cgacaacaat
501   gaaatttata gtaaaaggaa aatccgtcga ctttaaaagt cgtgagggtt
551   caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MW279182.1 nt Amana anhuiensis clone 1 chloroplas... 151573 bp Amana anhuiensis QL-PLN-00-007 567 bp View
MW279183.1 nt Amana sp. 13 QZ-2022 clone Y01 chlo... 151415 bp Amana sp. 13 QZ-2022 QL-PLN-00-007 567 bp View
OQ101217.1 nt Amana baohuaensis isolate WMZ1415 c... 151330 bp Amana baohuaensis QL-PLN-00-007 567 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.