JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

617 bp

1     cgaaatcggt agacgctacg gacttaattg gtttgagcct tagtatggaa
51    acctactaag tgaaaatttt caaattcaga gaaaccctgg aattaataaa
101   aatgggcaat cctgagccaa ctcctttttt caaaagaaaa aaataagggt
151   tcagaaagca agaaaaaaag gataggtgca gagactcaaa ggaagctgtt
201   ctaacaaatg gggttgactg tgctgtgttg ttataaaaat tcttccataa
251   aaattccaat caaaaaaaaa agggtgaagc atatacgtac tgaactatat
301   caaatgatta ataacaaccc gaatccttac ttttttttcg aatttttata
351   tatttatgaa atgaaaaaat ttatatgaaa aaaaaaaaaa atggaagaat
401   tttttggaat cgatttcaaa ttgaaagaag aatcaaatat tcattcatca
451   aataattcac tccatagtct gatagatttt ttgaagaact aattaatcgg
501   acgagaatga agatagagtc ccgttctaca tgtcaatact gacaacaatg
551   aaatttataa ttaagaagaa aatccgtcga ctttaaaaat cgtgagggtt
601   caagtccctc tatcccc

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
OM403708.1	nt	Phytolacca americana chloroplast, c...	155092 bp	Phytolacca americana	QL-PLN-00-007	617 bp	View
OM403707.1	nt	Phytolacca americana chloroplast, c...	155082 bp	Phytolacca americana	QL-PLN-00-007	617 bp	View
OM403709.1	nt	Phytolacca americana chloroplast, c...	155092 bp	Phytolacca americana	QL-PLN-00-007	617 bp	View
OM403710.1	nt	Phytolacca americana chloroplast, c...	155092 bp	Phytolacca americana	QL-PLN-00-007	617 bp	View
OM403711.1	nt	Phytolacca americana chloroplast, c...	155092 bp	Phytolacca americana	QL-PLN-00-007	617 bp	View
OM403716.1	nt	Phytolacca americana chloroplast, c...	155092 bp	Phytolacca americana	QL-PLN-00-007	617 bp	View
MH286315.1	nt	Phytolacca americana var. americana...	155094 bp	Phytolacca americana var. americana	QL-PLN-00-007	617 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.