Amplicon details

Amplicon:

588 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctaccaag tgataacttt caaattcaga gaaaccctgg aaaaaaaaat
101   gggcaatcct gagccaaatc ctgttttacg agcaggtcaa aaagcaataa
151   aaaataggat aggtgcagag actcaatgga agttattcaa acaaatggga
201   ttgaatggct ttgcgttggt aaaagaatac ttctatcaaa actcaagcaa
251   ggataaacat ataaaataaa ctatttcaag aaaaaaatag gaatggggta
301   cctattcttt tgatttactt tataagttgt agcaaaaaga attttataca
351   aaatcaaaag aatcattctg aatccattgc aagttaatga atagaatatt
401   cattaataaa aaagaaaacc attcactcca taatctgata aatcttttga
451   aaaacagatt aatcggacga gaataaagat agagtcccgt tctacatgtc
501   aatatcaata ccgacaacaa tgaaagttat agtaagagga aaatccgtcg
551   actttaaaaa tcgtgagggt tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
ON684537.1 nt Cistus ladanifer subsp. sulcatus is... 599 bp Cistus ladanifer subsp. sulcatus QL-PLN-00-007 588 bp View
ON684533.1 nt Cistus ladanifer isolate BPTPS031 t... 599 bp Cistus ladanifer QL-PLN-00-007 588 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.