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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 587 bp 
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ctttttccga aaaaaaaagg gtaggtgcag
151   agactcaatg gaagctgttc taacaaatgg agttgactac gttgcgttag
201   taaaggaatg aatccttcta tcgaaactcc agaaaagatg aaagataaac
251   gtattacgta ctgaaatact atttgattaa tgacaacccg aatctccatt
301   tttttttttt ttttatttat atacaaaatg atatataaaa atgaacgaat
351   tgttctgaat cgattccaat atctccaagt tgaaaaaaga atcgaatatt
401   cattgatcaa atcatttact ccatcataca tagtctgata gatcttttga
451   agaactgatt aatcagatgc gaatagaata aagatagagt cccattctac
501   atgtcaatac cgacaaaaat gaaatttata gtaagaggaa aatccgtcga
551   ctttaaaaat cgtgagggtt caagtccctc tatcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MZ427950.1 nt Trichosanthes kirilowii isolate 160... 156980 bp Trichosanthes kirilowii QL-PLN-00-007 587 bp View
MZ636532.1 nt Trichosanthes kirilowii chloroplast... 156568 bp Trichosanthes kirilowii QL-PLN-00-007 587 bp View
MN542395.1 nt Trichosanthes kirilowii chloroplast... 156794 bp Trichosanthes kirilowii QL-PLN-00-007 587 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.