Amplicon details

Amplicon:

601 bp
1     cgaaatcggt agacgctacg gacttaattg gtttgagcct tagtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccctgg aattaaagaa
101   atgggcaatc ctgagccaac tcctgctttc caaaaggaaa gaaaaagagg
151   ataggtgcag agactcaatg gaagctgttc taacaaaggg aattgactgt
201   cttgcgttgt aatatgttat aagaattttt cgatctaaac tccaaaagtg
251   atgaagaaga aacctatagg tatacgtact taaatagaaa gactatacta
301   tgatataata aataaaaaat gcaaaaatat tgataacgac ccgaattttt
351   attttatgaa tatgaaaaaa atggaagaat ttttgtgaat cgattccaag
401   ttgaagaaag aatcgaatat tcgtttatta aattaaagca tttactccac
451   ggtttggtag atcttttgaa gaactgaccc atcggatgag aatgaagata
501   gagtcccatt ctacgtgtca atcccgacac caatgaaatt tatagtaaga
551   ggaaaatccg tcgactttat aaatcgtgag ggttcaagtc cctctatccc
601   c 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MZ073665.1 nt Persicaria perfoliata chloroplast, ... 160730 bp Persicaria perfoliata QL-PLN-00-007 601 bp View
MZ748477.1 nt Persicaria perfoliata chloroplast, ... 160680 bp Persicaria perfoliata QL-PLN-00-007 601 bp View
ON229589.1 nt Persicaria perfoliata voucher SD370... 160737 bp Persicaria perfoliata QL-PLN-00-007 601 bp View
OR730805.1 nt Persicaria perfoliata voucher kbg c... 160724 bp Persicaria perfoliata QL-PLN-00-007 601 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.