Amplicon details

Amplicon:

585 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aatgggcaat cctgagccaa atcctgattt tcgaaaacaa acaaagattc
151   agaaagcgaa aataaaaaaa ggataggtgc agagactcaa tggaagctgt
201   tctaacaaat ggagttgact gcgttggtag aggaatcctt ccatcgaaat
251   tttcgaaagg atgaaagaga aacctatata catacgcata cgtactgaaa
301   tactatagca aacgattaat gacgacgcaa atctgtatgc gtattttttt
351   tatatgaaaa tggaagaatt gttgcgaatc gattcgacat tgaataaaga
401   attgactatt cattgatcaa atcatttact ccatagtctg atagatcttt
451   tgaagaactg attaatcgga cgagaataaa gatagagtcc cattctacat
501   gtcaataccg acaacaatga aatttatagt aagaggaaaa tccgtcgact
551   ttaaaaatcg tgagggttca agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
AJ430874.1 nt Diospyros kaki chloroplast tRNA-Leu... 1362 bp Diospyros kaki QL-PLN-00-007 585 bp View
MW557547.1 nt Diospyros kaki chloroplast, complet... 157773 bp Diospyros kaki QL-PLN-00-007 585 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.