Amplicon details

Amplicon:

581 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggcatgctg
51    actagtaggg aacctactaa gtgataactt tcaaattcag agaaaccctg
101   gaattaataa aaatgggcaa tcctgagcca actcctgttt tcaaaaaagt
151   aaaacaaatt cttaaagtga gaagaaataa tggataggtg cagagactca
201   acggaagctg ttctaacaaa tggagttgac tgtgttgtta taagaattct
251   tccatgaatt cttccatcaa aacttaaaaa aagatcaaga aaaaccctat
301   atttagataa atacgtactg aaatactcta aaaaagaaaa aaacgtctta
351   atgataatga cggccaaaat atgtcttttt tatatgaaaa atggaagaat
401   attcatttat caaagtattc gctccatggt ctgatagatt tttttttgac
451   gaactgctca atcggacgag aataaagata gagtcccatt ctacatgtca
501   atactgacaa caatgaaatt tatagtatga ggaaaatccg tcgactttag
551   aaatcgtgag ggttcaagtc cctctatccc c 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KJ729791.1 nt Reaumuria soongarica clone 1 tRNA-L... 1033 bp Reaumuria songarica QL-PLN-00-007 581 bp View
KJ729793.1 nt Reaumuria soongarica clone 3 tRNA-L... 1032 bp Reaumuria songarica QL-PLN-00-007 581 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.