Amplicon details |
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Amplicon: |
613 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acttgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc ccttttttga aaaacaagtg gttctcaaac 151 tagaacccaa aggaaaagga taggtgcaga gactcaatgg aagctgttct 201 aacgaatcga ggtgtaatta cgttgtgttg gtagtgaaac tccctctaaa 251 ttacaaagaa gggctttata catctaatac acacgtatag atactgacat 301 agcaaacgat taatcacaga acccatacca taatataggt tctttattta 351 ttttttagaa tgaaattagg aatgattatg aaatagaaaa ttctgaattt 401 tttttagaat tattgtgaat acattccact cgaatattga gtaatcaaat 451 ccttcaattc attgtttttg agatatttta aaaatagaat taatcggacg 501 aggataaaga gagagtccca ttctacatgt caatactgac aacaatgaaa 551 tttctagtaa aaggaaaatc cgtcgacttt ataagtcgtg agggttcaag 601 tccctctatc ccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MW186709.1 | nt | Orinus intermedius chloroplast, com... | 134283 bp | Orinus intermedius | QL-PLN-00-007 | 613 bp | View |
| MW057690.1 | nt | Orinus thoroldii chloroplast, compl... | 134190 bp | Orinus thoroldii | QL-PLN-00-007 | 613 bp | View |
| MW133235.1 | nt | Orinus kokonoricus chloroplast, com... | 134454 bp | Orinus kokonoricus | QL-PLN-00-007 | 613 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.