Amplicon details |
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Amplicon: |
559 bp | |
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtaaggaa 51 acctactaag tgatgacttt caaattcaga gaaaccccgg aattaagaaa 101 aagggcaatc ctgagccaaa tcctattttc cacaaacaaa ggttcagaaa 151 acgaaaacaa ggataggtgc agagactcga cggaagctgt tctaacaaat 201 ggagttggcc gcgttggtag agaaatcttt ccatcgaaaa ttcagaaagg 251 atgaaagata tacatacgta ttgaatacta tatcaaatga ttaatgccga 301 cccgaatgaa tctgtatttt tctataaaaa acggaagaat tggtgtgatt 351 cgattctttc ttcaatgtgg aatcgaatat tcattgatca aatgattcac 401 tccatagtct gtagatcctc ttttcaagaa ccggattaat cggacgagaa 451 taaagataga gtcccgttct acatgtcaat gctggcaaca atgaaattta 501 tagtaagagg aaaatccgtc gacttaaaaa atcgtgaggg ttcaagtccc 551 tctatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| KF539845.2 | nt | Secamone afzelii plastid, partial g... | 154461 bp | Secamone afzelii | QL-PLN-00-007 | 559 bp | View |
| OP133598.1 | nt | Secamone elliptica subsp. siamica v... | 154770 bp | Secamone elliptica subsp. siamica | QL-PLN-00-007 | 559 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.