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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 565 bp 
1     cgaaatcggt agacgctacg gacttaatta gattgagcct tgatgtggga
51    aacctactaa gtgataactt tcaaattcag agaacccccg gaattaataa
101   aaatgggtga tcctgatcca aatcctgttt tctgaaaacc tgaaaacaaa
151   ggctcaaaaa acgaaaaatg ggataggtgc agagactcaa tggaagctgt
201   tctaacaaat ggagttggct gcgttgttag aggaatcctt tccgcggaaa
251   cttcagaaag gatgaaggat aaacgtatct attgaatact atatcaaatg
301   attaatgatg gcccgaatcc gtatttttga atatgaaaaa acggaagaat
351   cggtgtgaat tgattccaca ttgaaaaaaa atcgaatatt cattcatcaa
401   atcattcact ccacggtcca ataggtcttt taaagaacta attaattgga
451   cgagaataaa gatagagtcc cattctacat gtcaataccg gcaacaatga
501   aatttatagt aagaggaaaa tccgtcgact ttaaaaatcg tgagggttca
551   agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MZ508423.1 nt Scutellaria baicalensis voucher TKM... 151801 bp Scutellaria baicalensis QL-PLN-00-007 565 bp View
OM397372.1 nt Scutellaria grandiflora chloroplast... 151690 bp Scutellaria grandiflora QL-PLN-00-007 565 bp View
OP837957.1 nt Scutellaria baicalensis isolate SBW... 151702 bp Scutellaria baicalensis QL-PLN-00-007 565 bp View
KR233163.2 nt Scutellaria baicalensis chloroplast... 152731 bp Scutellaria baicalensis QL-PLN-00-007 565 bp View
OP597814.1 nt Scutellaria baicalensis isolate S04... 151875 bp Scutellaria baicalensis QL-PLN-00-007 565 bp View
OP837955.1 nt Scutellaria baicalensis isolate SBP... 151876 bp Scutellaria baicalensis QL-PLN-00-007 565 bp View
OP837956.1 nt Scutellaria baicalensis isolate SBR... 151876 bp Scutellaria baicalensis QL-PLN-00-007 565 bp View
MF521633.1 nt Scutellaria baicalensis isolate BOP... 151817 bp Scutellaria baicalensis QL-PLN-00-007 565 bp View
MF521632.1 nt Scutellaria baicalensis isolate BOP... 151824 bp Scutellaria baicalensis QL-PLN-00-007 565 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.