Amplicon details

Amplicon:

538 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggataggtg
151   cagagactca atggaagctg ttctaacaaa tggagttgac tgcgccggta
201   gaggaatctt tccatggaaa ctttagaaag gataaacgca tctattgaat
251   actatatcaa atgattaatg ttggcccgaa tccgtttttt ttaatatgaa
301   aatgaaaaaa tggaaaaatc ggtgtgaatt tatttcacgt tgaagaaaaa
351   atcgaatatt catcaactca ttcactccat agtccgatag atcttttaaa
401   taactgatta atcggacgag aataaagata gagtcccatt ctacatgcta
451   catgtgaata ccggcaacaa tgaaatttat agtaatagga aaatccgtcg
501   actttaaaaa tcgtgagggt tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MW387500.1 nt Nepeta hemsleyana chloroplast, comp... 152183 bp Nepeta hemsleyana QL-PLN-00-007 538 bp View
OP186464.1 nt Nepeta hemsleyana voucher H3050095 ... 152177 bp Nepeta hemsleyana QL-PLN-00-007 538 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.