Amplicon details

Amplicon:

582 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactagg tgataacttt caaattcaga gaaaccccgg aattaaaaaa
101   aaatgggcaa tcctgagcca aatcctgtct tctcaaaata aaggttcata
151   aagcgaaaag gggataggtg cagagactcg atggaagctg ttctaaaaca
201   aatggagttg actgcgttgg tagatgaatc ttttcatcga aacttcagaa
251   aagatgaagg ataaacggat ctattgaata ctaaaatatc taaaaaaaag
301   gaatgacggc ccgagtctgc atctgtattt ttttagatga aaaatagaag
351   aattggtggg aattgattcc acattcaaga aagaatcgaa tattcattca
401   tcaaatcacc ccactccgta gtctgatagt tttagtcttt ttttaaagaa
451   ctgattaatt aattggacga gaataaagat agagtcccgt tctacatgtc
501   aataccgaca gcaatgaaat ttatagtaat aggaaaatcc gtcgactttt
551   aaaatcgtga gggttcaagt ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MZ779005.1 nt Plantago asiatica chloroplast, comp... 165045 bp Plantago asiatica QL-PLN-00-007 582 bp View
ON684540.1 nt Plantago major isolate BPTPS058 tRN... 593 bp Plantago major QL-PLN-00-007 582 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.