Amplicon details |
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Amplicon: |
523 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc cacttttttc aaaaaagtgg ttctcaaact 151 agaacccaaa ggaaaaggat aggtgcagag actcaatgga agctgttcta 201 acgaatcgaa gtaataacga ttaatcacag aacccatatt ataatatagg 251 ttctttattt tattttgaga atgaaattag gaatgattat gaaatagaaa 301 attcataatt tttttagaat tattgtgaat ctattccaat cgaatattga 351 gtaatcaaat ccttcaattc attgttttcg agatctttta aaaagtggat 401 taatcggacg aggataaaga gagagtccca ttctacatgt caatactgac 451 aacaatgaaa tttctagtaa aaggaaaatc cgtcgacttt ataagtcgtg 501 agggttcaag tccctctatc ccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MW999225.1 | nt | Sorghum bicolor subsp. drummondii c... | 140754 bp | Sorghum bicolor subsp. drummondii | QL-PLN-00-007 | 523 bp | View |
| OQ843017.1 | nt | Sorghum bicolor cultivar Dochna chl... | 140644 bp | Sorghum bicolor | QL-PLN-00-007 | 523 bp | View |
| OR353656.1 | nt | Sorghum bicolor subsp. drummondii c... | 140754 bp | Sorghum bicolor subsp. drummondii | QL-PLN-00-007 | 523 bp | View |
| MG709461.1 | nt | Sorghum halepense voucher KL81 tRNA... | 523 bp | Sorghum halepense | QL-PLN-00-007 | 523 bp | View |
| LS398103.1 | nt | Sorghum arundinaceum genome assembl... | 140821 bp | Sorghum arundinaceum | QL-PLN-00-007 | 523 bp | View |
| LS398105.1 | nt | Sorghum halepense genome assembly, ... | 140810 bp | Sorghum halepense | QL-PLN-00-007 | 523 bp | View |
| LS398106.1 | nt | Sorghum x drummondii genome assembl... | 140754 bp | Sorghum bicolor subsp. drummondii | QL-PLN-00-007 | 523 bp | View |
| LS423604.1 | nt | Sorghum propinquum genome assembly,... | 140753 bp | Sorghum propinquum | QL-PLN-00-007 | 523 bp | View |
| MK348612.1 | nt | Sorghum bicolor isolate SbJ200 chlo... | 140663 bp | Sorghum bicolor | QL-PLN-00-007 | 523 bp | View |
| M13662.1 | nt | Sorghum bicolor chloroplast split L... | 862 bp | Sorghum bicolor | QL-PLN-00-007 | 523 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.