Amplicon details |
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Amplicon: |
581 bp | |
1 cgaaatcggt agacgctacg gacttaattg gattgagcct taatatggaa 51 acctactaag tgataacttt caaattcagg gaaaccctgg aataaaaaat 101 gggcaatcct gagccaaatc ccgttttccg aaaaccagaa aacgctaata 151 aaaaaaggat aggtgcagag actcaatgga agctgttcta acaaaaacaa 201 atggagttga ctatgttacg atgttaaacg aatccttcca tcaaaactcc 251 agaaccagaa aggatgaagg ataaacctat atacataggt actgaaatat 301 tatatcaaat gattaatgat ggctcgaatc tctatttttt tatatgaaaa 351 atgaaagaat tgttgtaaat cgattccaag ttgaagaaag aaaagaatcg 401 aatattcatt gatcaaatca ttcactccat agtccgatag atcatttgaa 451 gaacttatta atcggacgag aataaagaga gagtcccatt ctacatgtca 501 atatcgacag caatgaaatt tatagtaaga ggaaaatccg tcgactttaa 551 aaatcgtgag ggttcaagtc cctctatccc c |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MT513320.1 | nt | Tetrastigma stenophyllum isolate 39... | 1013 bp | Tetrastigma stenophyllum | QL-PLN-00-007 | 581 bp | View |
| MT513322.1 | nt | Tetrastigma loheri isolate 4007 tRN... | 1012 bp | Tetrastigma loheri | QL-PLN-00-007 | 581 bp | View |
| MT513323.1 | nt | Tetrastigma loheri isolate 4026 tRN... | 1012 bp | Tetrastigma loheri | QL-PLN-00-007 | 581 bp | View |
| KT597224.1 | nt | Tetrastigma cf. loheri PBP-2017 iso... | 1024 bp | Tetrastigma cf. loheri PBP-2017 | QL-PLN-00-007 | 581 bp | View |
| KT597230.1 | nt | Tetrastigma cf. loheri PBP-2017 iso... | 1022 bp | Tetrastigma cf. loheri PBP-2017 | QL-PLN-00-007 | 581 bp | View |
| KT597233.1 | nt | Tetrastigma cf. loheri PBP-2017 iso... | 1018 bp | Tetrastigma cf. loheri PBP-2017 | QL-PLN-00-007 | 581 bp | View |
| KT597236.1 | nt | Tetrastigma cf. loheri PBP-2017 iso... | 983 bp | Tetrastigma cf. loheri PBP-2017 | QL-PLN-00-007 | 581 bp | View |
| MT513319.1 | nt | Tetrastigma loheri isolate 3932 tRN... | 1012 bp | Tetrastigma loheri | QL-PLN-00-007 | 581 bp | View |
| MT513321.1 | nt | Tetrastigma philippinense isolate 3... | 1013 bp | Tetrastigma philippinense | QL-PLN-00-007 | 581 bp | View |
| MT513324.1 | nt | Tetrastigma loheri isolate 4033 tRN... | 1012 bp | Tetrastigma loheri | QL-PLN-00-007 | 581 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.