JRC GMO-Amplicons | EURL GMFF

Amplicon details

Amplicon:

571 bp

1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt cccaaaacaa aggtttcaaa
151   aaacgaaaaa aaaggatagg tgcagagact caatggaagc tgttctaaca
201   aatggagttg actgcgtcgg tagaggaatc tttccatgga aactttattt
251   tataaaggat gaaagataaa cgcacctatt gaatactata tcaaatgatt
301   aatgttggcc cgaatctatt tttttaatat gaaaatgaaa aaatggaaaa
351   atcggtgtga atttttttca cgttgaagaa aaaatagaat attcatcaac
401   tcattcactc cgtagtccga tagatctttt aaagaactta ttaatcggac
451   gagaataaag atagagtccc attctacatg ctacatatca ataccggcaa
501   caatgaaatt tatagtaaga ggaaaatccg tcgactttaa aaatcgtgag
551   ggttcaagtc cctctatccc c

An identical amplicon is found in the following matches:

Record ID	Database	Record description	Record length	Taxon	Method	Amplicon size	Match details
ON684556.1	nt	Mentha x piperita isolate BPTPS169 ...	582 bp	Mentha x piperita	QL-PLN-00-007	571 bp	View
KC414276.1	nt	Mentha canadensis isolate 511190001...	919 bp	Mentha canadensis	QL-PLN-00-007	571 bp	View
ON641273.1	nt	Mentha x piperita isolate BPTPS132 ...	152046 bp	Mentha x piperita	QL-PLN-00-007	571 bp	View
ON684554.1	nt	Mentha suaveolens isolate BPTPS159 ...	582 bp	Mentha suaveolens	QL-PLN-00-007	571 bp	View
ON641265.1	nt	Mentha suaveolens isolate BPTPS057 ...	151824 bp	Mentha suaveolens	QL-PLN-00-007	571 bp	View
ON641274.1	nt	Mentha spicata isolate BPTPS133 vou...	152070 bp	Mentha spicata	QL-PLN-00-007	571 bp	View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.