European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 536 bp 
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acatactaag tgatcacttt caaattcaga gaaaccctgg aattagaaat
101   gggcaatcct gagccaaatc ctgttttctg aaaaaaaaaa ataattcaat
151   caaaagaaaa agaatcaaaa aaggataggt gcagagactc aatggaagct
201   gttctaaaaa atggagttga ctgctgcatt atgttagtca agtcaaggaa
251   tccttgcata aaaactttca aaaagatgaa ggataaactt tctttctata
301   aaactctaaa aagaaaaata ctttttcaat caattggaag ttgaataaag
351   aatcaaatat aatttgatca aatcatttac tccaaagtct gatatatctt
401   tttcaaaatg gattagtcag atgagaataa agatagagtc ccattctata
451   tgtcagtatt gacaacaatg aaatttatag tgagaggaaa atccgtcgat
501   tttataaatc gtgagggttc aagtccctct atcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
ON408219.1 nt Tetraena mongolica plastid, complet... 106176 bp Tetraena mongolica QL-PLN-00-007 536 bp View
ON408228.1 nt Tetraena mongolica plastid, complet... 106062 bp Tetraena mongolica QL-PLN-00-007 536 bp View
MK331720.1 nt Tetraena mongolica chloroplast, com... 106081 bp Tetraena mongolica QL-PLN-00-007 536 bp View
ON408218.1 nt Tetraena mongolica plastid, complet... 106184 bp Tetraena mongolica QL-PLN-00-007 536 bp View
ON408223.1 nt Tetraena mongolica plastid, complet... 106225 bp Tetraena mongolica QL-PLN-00-007 536 bp View
ON408224.1 nt Tetraena mongolica plastid, complet... 106211 bp Tetraena mongolica QL-PLN-00-007 536 bp View
ON408226.1 nt Tetraena mongolica plastid, complet... 106159 bp Tetraena mongolica QL-PLN-00-007 536 bp View
ON408227.1 nt Tetraena mongolica plastid, complet... 106177 bp Tetraena mongolica QL-PLN-00-007 536 bp View
ON408229.1 nt Tetraena mongolica plastid, complet... 106178 bp Tetraena mongolica QL-PLN-00-007 536 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.