Amplicon details

Amplicon:

557 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctgctaag tgatataact ttcaaattca gagaaaccca ggaactaata
101   aaaatgggca atcctgagcc aaatcctgtt ttctcaaaac aaaggttcaa
151   aaaacgaaaa aagggatagg tgcagagact caatggaagc tgttctaaca
201   aatggagttc actgcgctgg tagaggaatc tttccatgga aacttcagaa
251   aggatgaagg ataaatggat ctattgaata ctatatcgaa tgattcacga
301   tggcccgaat ctgtattttt taatatgaaa aatggaagaa ttggtgtgaa
351   ttgattccac attgaagaaa aaatcgaata ttcattcatc aaatcattca
401   ctccatagtc cgatagatct tttcaagaac tgattaatcg gacgagaata
451   aagatagagt cccgttctac atgtcaatac cggcaacaat gaaatttata
501   gtaataggaa aatccgtcga ctttaaaaat cgtgagggtt caagtccctc
551   tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MF967578.1 nt Ajuga decumbens plastid, complete g... 150377 bp Ajuga decumbens QL-PLN-00-007 557 bp View
MN814853.1 nt Ajuga ciliata chloroplast, complete... 150494 bp Ajuga ciliata QL-PLN-00-007 557 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.