Amplicon details

Amplicon:

554 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacca aggttcaaaa
151   aacgaaaaaa aaggataggt gcagagactc aatggaagct gttctaacaa
201   atggagttga ctgcgccggt agaggaacct ttccatggaa attttagaaa
251   ggatgaagga taaacgcatc tattgaatac tatatcaaac aaatgattaa
301   tgttggccct aatctgtttt tttaatatga aaatgaaaaa atagatgtga
351   atttttttca cgttgaagaa aaaatagaat attcatcaac tcattcactc
401   catagtccgg tagatctttt aaagaactga ttaatcggac gagaataaag
451   atagagtccc attctacatg tcaataccga caacaatgaa atttatagta
501   agaggaaaat ccgtcgactt taaaaatcgt gagggttcaa gtccctctat
551   cccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MF967576.1 nt Glechoma longituba plastid, complet... 151768 bp Glechoma longituba QL-PLN-00-007 554 bp View
MK609928.1 nt Glechoma longituba chloroplast, com... 153069 bp Glechoma longituba QL-PLN-00-007 554 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.