European Commission logo
Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 544 bp 
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcaaaa
151   aacgaaaaaa aaaggatagg tgcagagact caatggaagc tgttctaaca
201   aatgggagtt gactgtgctg gtagaggaat ctttccatgg aaactttaga
251   aaggatgaag gataaacgca tctattgaat actatatcaa atggttaatg
301   atggcccaaa tcttttaata tgaaaaaatg gaaaaattgg tgtgaattga
351   ttctaggttg aagaaaaaat aaaatattca tcaactcatt cgctccatag
401   tccgatagat aaagaactga ttaatcggac gagaataaag atagagtccc
451   attctacatg tcaatatcgg caacaatgaa atttatagta agaggaaaat
501   ccgtcgactt taaaaatcgt gagggttcaa gtccctctat cccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MW724787.1 nt Ocimum tenuiflorum voucher MH178055... 151758 bp Ocimum tenuiflorum QL-PLN-00-007 544 bp View
MW829604.1 nt Ocimum tenuiflorum voucher MH178054... 151722 bp Ocimum tenuiflorum QL-PLN-00-007 544 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.