Amplicon details |
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Amplicon: |
614 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggcaatttc caaattcaga gaaaccctgg aattaaaaaa 101 ggggcaatcc tgagccaatc catgttttga gaaaacaagt ggttctcgaa 151 ctagaaccca aaggaaaagg ataggtgcag agactcaatg gaagctgttc 201 taacgaatcg agttaattac gttgtgttgc tagcggaact cccttctaaa 251 ttagggaaag aagggctttc gaaatctaat acacacgtat agatactggc 301 atagcaaatg attaatcaca gaactcatat cataatatag gttctttaat 351 tcttttttaa aatgaaaata ggaatgatta tgaaatagaa aattcataat 401 ttttttagaa ttgttgtgaa tccattccaa tcgaatattg agtaatcaaa 451 tccttcaatt catagttttc gaaatctttt taaaagtgga ttaatcggac 501 gaggataaag agagagtccc attctacatg tcaatactga caacaatgaa 551 atttctagta aaaggaaaat ccgtcgactt tctaagtcgt gagggttcaa 601 gtccctctat cccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| NRN_EA679622 | nrnl1 | Sequence 58501 from patent US 73651... | 36527 bp | unidentified | QL-PLN-00-007 | 614 bp | View |
| NRN_GX946895 | nrnl1 | Sequence 42803 from patent US 7868149. | 11012 bp | unidentified | QL-PLN-00-007 | 614 bp | View |
| NRN_GX929536 | nrnl1 | Sequence 25444 from patent US 7868149. | 1428 bp | unidentified | QL-PLN-00-007 | 614 bp | View |
| BX119951.3 | nt | Oryza sativa chromosome 12, . BAC O... | 127267 bp | Oryza sativa | QL-PLN-00-007 | 614 bp | View |
| AP014968.1 | nt | Oryza sativa Japonica Group DNA, ch... | 27531856 bp | Oryza sativa Japonica Group | QL-PLN-00-007 | 614 bp | View |
| CP132246.1 | nt | Oryza sativa Japonica Group cultiva... | 28271460 bp | Oryza sativa Japonica Group | QL-PLN-00-007 | 614 bp | View |
| GX544476.1 | emblrelpat | Sequence 58501 from patent US 7790958. | 36527 bp | unidentified | QL-PLN-00-007 | 614 bp | View |
| EA679622.1 | emblrelpat | Sequence 58501 from patent US 7365185. | 36527 bp | unidentified | QL-PLN-00-007 | 614 bp | View |
| GX929536.1 | emblrelpat | Sequence 25444 from patent US 7868149. | 1428 bp | unidentified | QL-PLN-00-007 | 614 bp | View |
| GX946895.1 | emblrelpat | Sequence 42803 from patent US 7868149. | 11012 bp | unidentified | QL-PLN-00-007 | 614 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.