Amplicon details

Amplicon:

598 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgacaacttt caaattcaga gaaaccctgg aattcaaaaa
101   aatgggtaat cctgagccaa atcctatttt atgaaaacca acaaaacaac
151   aaagattcat aaagcaagaa taaaaaaagg ataggtgcag agactcaatg
201   gaagctgttc taacaaatgg agttgagcat gttgcgttgg tattggtaaa
251   ggaattcttt tatcgaaact ccagaaaggg aaaaaatgaa agataaacct
301   atatgcatac gtactgaata ctatctcaaa tgattaatga cgacgtgaat
351   ctcatctttt tctatatgaa aacgaaacga attgttgtga atcaattcga
401   agttgaaaaa agaatcgaat attcattgat taaatcattt cctccatggt
451   ctgagaaatc ttttgaagag cggattaatc agacgagaat aaagatagag
501   tcccattcta catgtcaata ctgacaacaa tgaaatttat agtaagagga
551   aaatccgtcg actttataaa tcgtgagggt tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OR582423.1 nt Laguncularia racemosa chloroplast, ... 160671 bp Laguncularia racemosa QL-PLN-00-007 598 bp View
MK656960.1 nt Laguncularia racemosa isolate LGBH0... 160672 bp Laguncularia racemosa QL-PLN-00-007 598 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.