Amplicon details

Amplicon:

595 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tgatcacttt caaattcaga gaaaccctgg aattaacaaa
101   aatgggcaat cctgagccaa atcctgtttt ctgaaaacaa acaaaggttc
151   agaaaaaaag gataggtgca gagactcaat ggaagctatt ctaacaaatg
201   gagttaaatg cattggtaga ggaatcttta catcgaaact tcagaaagaa
251   aaagaatgaa gtgaaggata aacgtatata catacgtatt gaatactcta
301   tcaaatgatt aatgacgacc cgaatccgta ttttttctat aaaaaataga
351   agaattggtg tgaatcgatt ctacagaatt ggtgtgaatc gattctacat
401   tgaagaaaga atcgaatatt cattgatcaa atcattcact ccatagtctg
451   atagatcctt tgaagaactg attaatcgga cgagaataaa gatagagtcc
501   cgttctacat gtcaataccg gcaacaatga aatttatagt aagaggaaaa
551   tccgtcgact ttaaaaatcg tgagggttca agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OP846044.1 nt Lycium barbarum var. auranticarpum ... 154978 bp Lycium barbarum var. auranticarpum QL-PLN-00-007 595 bp View
OM804224.1 nt Lycium barbarum clone V12L0031 Ning... 1155 bp Lycium barbarum QL-PLN-00-007 595 bp View
OP846045.1 nt Lycium sp. YD-2023a chloroplast, co... 154976 bp Lycium sp. YD-2023a QL-PLN-00-007 595 bp View
OP846050.1 nt Lycium ruthenicum chloroplast, comp... 154976 bp Lycium ruthenicum QL-PLN-00-007 595 bp View
MN916581.1 nt Lycium barbarum clone V12L0031 Ning... 1155 bp Lycium barbarum QL-PLN-00-007 595 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.