Amplicon details |
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Amplicon: |
565 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa 101 gggcaatcct gagccaaatc cgtattttga gaaaacctgg gggttctcga 151 actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gagttaatta cgttgtattg ttagtggaat tccttctaaa 251 ttcgagaaag aagggcttta tacatgtaat aaacacgtat agatactgac 301 atagcaaacg attaatcaca gaacctatat tataatatat ggttctttat 351 tcttttttag aattattgtg aatacattcc aatcgaatat ttagtaatca 401 aatgcttcaa ttcaaagttt tgaggtcttt aaaaaagtgg attaatcgga 451 cgaggacaaa gagagagtcc cattctacat gtcaatactg acaacaatga 501 aatttctagt aaaaggaaaa tccgtcgact ttataagtcg tgagggttca 551 agtccctcta tcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| JF904755.1 | nt | Alopecurus hitchcockii voucher Pete... | 1757 bp | Alopecurus hitchcockii | QL-PLN-00-007 | 565 bp | View |
| OK247924.1 | nt | Alopecurus carolinianus trnT-trnL i... | 1722 bp | Alopecurus carolinianus | QL-PLN-00-007 | 565 bp | View |
| KM524037.1 | nt | Alopecurus aequalis voucher US:Pete... | 1722 bp | Alopecurus aequalis | QL-PLN-00-007 | 565 bp | View |
| KM524043.1 | nt | Alopecurus hitchcockii voucher US:P... | 1722 bp | Alopecurus hitchcockii | QL-PLN-00-007 | 565 bp | View |
| KM524051.1 | nt | Alopecurus saccatus voucher US:Howe... | 1717 bp | Alopecurus saccatus | QL-PLN-00-007 | 565 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.