Amplicon details |
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Amplicon: |
614 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa 101 ggggcaatcc tgagccaaat ccgtgttttg agaaaacaag cggttctcga 151 actacaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gagttaatta cgttgtgttg ctagcggaac tcccttctaa 251 attagagaaa gaagggcttt cgaaatctaa tacacacgta tagatactgg 301 catagcaaac gattaatcac agaactcata tcataatata tgttctttaa 351 ttctttttta gaatgaaaat aggaatgatt atgaaataga aaattcataa 401 tttttttaga attgttgtga atccattcca atcgaatatt gagtaatcaa 451 atccttcaat tcatagtttt caaatctttt taaaagtgga ttaatcggac 501 gaggataaag agagagtccc attctacatg tcaatactga caacaatgaa 551 atttctagta aaaggaaaat ccgtcgactt tctaagtcgt gagggttcaa 601 gtccctctat cccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MT726929.1 | nt | Oryza australiensis chloroplast, co... | 135193 bp | Oryza australiensis | QL-PLN-00-007 | 614 bp | View |
| KF359905.1 | nt | Oryza glumipatula chloroplast, comp... | 135224 bp | Oryza glumipatula | QL-PLN-00-007 | 614 bp | View |
| KF359916.1 | nt | Oryza australiensis chloroplast, co... | 135222 bp | Oryza australiensis | QL-PLN-00-007 | 614 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.