Amplicon details |
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Amplicon: |
565 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcctgtttt ccgaaaccaa gggttcagaa 151 agtgaaaaaa ggataggtgc agagactcaa cggaagctgt tctaacaaat 201 ggagttggct gcgttagtag agaaatcttt ccatcgaaaa ttccgaaagg 251 ataaagtgaa agataaacgt atatacgtat tgaatactat atcaaatgat 301 taatgacgac tcgactgaat ctgtattttt tatatgaaaa tggaagaatt 351 ggtgtgaata gattccacat tgaagaaaga atcgaatatt cattgattaa 401 acgattcact ccatagtctg atagatcttt tcaagaattg attaatcgga 451 cgagaataaa gatagagtcc cgttctacgt gtcaatgtcg gcaacaatga 501 aatttatagt aagaggaaaa tccgtcgact ttacaaatcg tgagggttca 551 agtccctcta tcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| HM536231.1 | nt | Jackiopsis ornata isolate cA047 trn... | 1604 bp | Jackiopsis ornata | QL-PLN-00-007 | 565 bp | View |
| HM536232.1 | nt | Jackiopsis ornata isolate cA048 trn... | 1570 bp | Jackiopsis ornata | QL-PLN-00-007 | 565 bp | View |
| HM536233.1 | nt | Jackiopsis ornata isolate cA049 trn... | 1609 bp | Jackiopsis ornata | QL-PLN-00-007 | 565 bp | View |
| KY378669.1 | nt | Jackiopsis ornata chloroplast, part... | 128852 bp | Jackiopsis ornata | QL-PLN-00-007 | 565 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.