Amplicon details

Amplicon:

598 bp
1     cgaaatcggt agacgctacg gacttaatta gattgagcct tggtatggaa
51    acctaccaag tgagaacttt caaattcaga gaaaccctgg aattaacaac
101   gggcaatcct gagccaaatc ctgttttccg aaaacaaaaa agagttcaaa
151   aagtgagaat aaaaaggata ggtgcagaga ctcaatggaa gctgttctaa
201   caaatggagt tgacgggatt tcgtttcgtt agtaaagtag taatccttcc
251   atcgaaactc cagaaaagaa aggatcgaag ataaacgtat atatacatat
301   acgtaccgaa atactatctc aactaaatga atgacgacgc cgaatctcta
351   ttcattaata tttataatga aagatgatgt aaatggattc aaagttgaag
401   aaaaagtcga atattcattc atcaaatcat tcactccatc ataacataat
451   ccgatatttc ttttgaagaa ctgattaatc ggacaagaat aaagatagag
501   tcccattcta catgtcaata ctgacaacaa tgaaatttat agtaatagga
551   aaatccgtcg actttaaaaa tcgtgagggt tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
FJ801054.1 nt Lysiphyllum carronii voucher Weston... 1022 bp Lysiphyllum carronii QL-PLN-00-007 598 bp View
FJ801057.1 nt Lysiphyllum gilvum voucher Weston 2... 992 bp Lysiphyllum gilvum QL-PLN-00-007 598 bp View
FJ801059.1 nt Lysiphyllum hookeri voucher Weston ... 991 bp Lysiphyllum hookeri QL-PLN-00-007 598 bp View
FJ801083.1 nt Lysiphyllum cunninghamii voucher Fa... 1022 bp Lysiphyllum cunninghamii QL-PLN-00-007 598 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.